STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115044446Tropomyosin alpha-4 chain-like. (249 aa)    
Predicted Functional Partners:
ENSENLP00000040784
Troponin T2e, cardiac.
   
 0.966
ENSENLP00000043950
Troponin T2d, cardiac.
   
 0.966
actc1
Actin alpha cardiac muscle 1.
   
 0.958
ACTA1
Actin, alpha cardiac.
   
 0.936
ACTA1-2
Actin, alpha skeletal muscle A.
   
 0.936
LOC115035649
Actin, alpha cardiac.
   
 0.936
LOC115061462
Myosin light chain 1, skeletal muscle isoform.
   
 0.930
ENSENLP00000003960
Troponin T type 2b (cardiac).
   
 0.923
ENSENLP00000015859
Troponin T type 2a (cardiac).
   
 0.923
LOC115036699
Troponin T, cardiac muscle isoforms-like.
   
 0.909
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.