STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttc27Tetratricopeptide repeat domain 27. (844 aa)    
Predicted Functional Partners:
eed
Embryonic ectoderm development.
   
    0.929
wdr36
WD repeat domain 36.
   
    0.923
wdr3
WD repeat domain 3.
   
  
 0.905
nat10
N-acetyltransferase 10.
   
    0.897
tbl3
Transducin beta like 3.
   
  
 0.881
EFL1
Elongation factor like GTPase 1.
   
 
 0.880
polr1b
RNA polymerase I subunit B.
   
    0.861
polr3b
RNA polymerase III subunit B.
   
    0.858
rrp12
Ribosomal RNA processing 12 homolog.
   
    0.848
UTP18
UTP18 small subunit processome component.
   
    0.843
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.