STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
baz2aBromodomain adjacent to zinc finger domain 2A. (2625 aa)    
Predicted Functional Partners:
pole3
DNA polymerase epsilon 3, accessory subunit.
    
 0.971
smarca5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
    
 0.954
chd1l
Chromodomain helicase DNA binding protein 1 like.
    
 0.908
ENSENLP00000004818
Helicase, lymphoid specific.
    
 0.908
ENSENLP00000010101
Chromatin accessibility complex subunit 1.
   
 0.901
ercc6
ERCC excision repair 6, chromatin remodeling factor.
    
 0.881
gtf3c5
General transcription factor IIIC subunit 5.
    
  0.848
sf3b1
Splicing factor 3b subunit 1.
   
 0.842
mybbp1a
MYB binding protein 1a.
    
 0.819
nfyc
Nuclear transcription factor Y subunit gamma.
   
 0.760
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.