STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000005948ATM serine/threonine kinase. (3043 aa)    
Predicted Functional Partners:
ENSENLP00000047936
ATR serine/threonine kinase.
   
0.999
mre11
MRE11 homolog, double strand break repair nuclease.
   
 0.997
nbn
Nibrin.
    
 0.997
ENSENLP00000035331
Tumor protein p53 binding protein, 1.
    
 0.997
rad50
RAD50 double strand break repair protein.
   
 0.996
LOC115058519
Cellular tumor antigen p53-like.
   
 0.996
ENSENLP00000053539
BRCA1 associated RING domain 1.
    
 0.996
slf1
SMC5-SMC6 complex localization factor 1.
   
 0.994
ENSENLP00000011738
annotation not available
    
 0.994
xrcc6
X-ray repair cross complementing 6.
    
 0.994
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.