STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115055234Serine/threonine-protein kinase VRK1-like. (608 aa)    
Predicted Functional Partners:
ENSENLP00000009191
LTV1 ribosome biogenesis factor.
    
 0.911
bysl
Bystin like.
    
 0.873
riok2
RIO kinase 2.
    
 0.869
ankle2
Ankyrin repeat and LEM domain containing 2.
   
 0.861
tsr1
TSR1 ribosome maturation factor.
    
 0.836
ENSENLP00000010745
annotation not available
    
 0.826
LOC115054183
Barrier-to-autointegration factor.
    
 0.826
ENSENLP00000008358
annotation not available
    
 0.810
rps3
Ribosomal protein S3.
    
 0.789
rps2
Ribosomal protein S2.
    
 0.765
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.