STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115044953Sphingomyelin phosphodiesterase 5-like. (583 aa)    
Predicted Functional Partners:
smpd2
Sphingomyelin phosphodiesterase 2.
     
 0.938
smpd1
Sphingomyelin phosphodiesterase 1.
     
 0.938
sgms2
Sphingomyelin synthase 2.
     
 0.924
LOC115044708
Ectonucleotide pyrophosphatase/phosphodiesterase family member 7-like.
     
 0.923
ENPP7
Ectonucleotide pyrophosphatase/phosphodiesterase 7.
     
 0.923
LOC115058640
Phosphatidylcholine:ceramide cholinephosphotransferase 2-like.
     
 0.921
sgms1
Sphingomyelin synthase 1.
     
 0.920
cers6
Ceramide synthase 6.
     
 0.916
smpd4
Sphingomyelin phosphodiesterase 4.
     
 0.903
ENSENLP00000032684
N-acylsphingosine amidohydrolase 2.
     
 0.840
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.