STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ifih1Interferon induced with helicase C domain 1. (985 aa)    
Predicted Functional Partners:
dhx58
DExH-box helicase 58.
  
0.985
mavs
Mitochondrial antiviral signaling protein.
    
 0.969
fancl
FA complementation group L.
    
 0.962
fancg
FA complementation group G.
    
 0.961
fancf
FA complementation group F.
    
 0.959
ENSENLP00000011449
annotation not available
   
 0.958
ENSENLP00000051534
FA complementation group C.
    
 0.958
ENSENLP00000005495
DNA topoisomerase III alpha.
   
 0.956
rps27a
Ribosomal protein S27a.
   
 0.955
tkfc
Triokinase and FMN cyclase.
    
 0.941
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.