STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atoh7Atonal bHLH transcription factor 7. (139 aa)    
Predicted Functional Partners:
tcf12
Transcription factor 12.
    
 
 0.603
TCF12
Transcription factor 12.
    
 
 0.603
TCF4
Transcription factor 4.
    
 
 0.603
tcf3
Transcription factor 3.
    
 
 0.603
LOC115057183
Transcription factor E2-alpha-like.
    
 
 0.603
vsx1
Visual system homeobox 1.
   
  
 0.595
VSX2
Visual system homeobox 2-like.
   
  
 0.542
ENSENLP00000021552
annotation not available
   
  
 0.522
ENSENLP00000053799
Forkhead box N4.
   
  
 0.516
pou4f2
POU class 4 homeobox 2.
      
 0.489
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.