STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACTA1Actin, alpha cardiac. (377 aa)    
Predicted Functional Partners:
LOC115041460
Tropomyosin alpha-1 chain-like.
   
 0.942
LOC115042577
Tropomyosin alpha-1 chain.
   
 0.942
mysm1
Myb like, SWIRM and MPN domains 1.
    
 0.941
LOC115044446
Tropomyosin alpha-4 chain-like.
   
 0.936
LOC115051602
Tropomyosin beta chain.
   
 0.936
LOC115058180
Tropomyosin alpha-1 chain-like.
   
 0.936
TPM1
Tropomyosin 1.
   
 0.936
LOC115051500
Tropomyosin alpha-3 chain.
   
 0.936
arid4a
AT-rich interaction domain 4A.
    
 0.931
arid4b
AT-rich interaction domain 4B.
    
 0.931
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.