STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115043270FERM domain-containing protein 4B-like. (965 aa)    
Predicted Functional Partners:
sav1
Salvador family WW domain containing protein 1.
    
 0.684
ENSENLP00000052005
FERM domain containing 1.
    
0.654
ENSENLP00000054411
FERM domain containing 6.
    
0.654
LOC115044059
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3-like.
    
 0.587
LOC115046577
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3-like.
    
 0.587
ENSENLP00000047345
Thyroid hormone receptor interactor 12.
    
 0.577
LOC115036502
Pleckstrin homology domain-containing family A member 5-like.
    
 0.544
PLEKHA5
Pleckstrin homology domain containing A5.
    
 0.544
LOC115043488
Syndecan-4-like.
    
  0.522
LOC115045564
Syndecan-2-like.
    
  0.522
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.