STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl39Mitochondrial ribosomal protein L39. (335 aa)    
Predicted Functional Partners:
ENSENLP00000016939
Mitochondrial ribosomal protein S31.
   
 
 0.985
ENSENLP00000008432
Mitochondrial ribosomal protein L22.
   
 
 0.977
mrpl1
Mitochondrial ribosomal protein L1.
   
 
 0.974
mrpl16
Mitochondrial ribosomal protein L16.
   
 0.972
mrpl30
Mitochondrial ribosomal protein L30.
   
 
 0.972
mrpl44
Mitochondrial ribosomal protein L44.
  
 
 0.970
ENSENLP00000028411
Mitochondrial ribosomal protein L13.
  
 
 0.967
mrps9
Mitochondrial ribosomal protein S9.
  
 
 0.965
mrpl21
Mitochondrial ribosomal protein L21.
  
 
 0.964
mrpl58
Mitochondrial ribosomal protein L58.
  
 
 0.964
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.