STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115043569Deoxyribonuclease gamma-like. (286 aa)    
Predicted Functional Partners:
tbk1
TANK binding kinase 1.
   
 0.923
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 0.923
ENSENLP00000023245
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
   
 0.860
tradd
TNFRSF1A associated via death domain.
     
 0.838
ENSENLP00000014226
Optineurin.
   
 0.836
ENSENLP00000037681
annotation not available
     
 0.836
azi2
5-azacytidine induced 2.
   
 
 0.818
LOC115052297
TNF receptor-associated factor 2-like.
    
 0.804
LOC115058291
TNF receptor-associated factor 5-like.
    
 0.804
traf3
TNF receptor associated factor 3.
    
 0.804
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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