STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000008563Katanin p80 (WD repeat containing) subunit B 1. (662 aa)    
Predicted Functional Partners:
ENSENLP00000014277
Katanin p60 subunit A-like 2.
   
 
 0.958
LOC115061692
Katanin p60 ATPase-containing subunit A-like 1.
   
 
 0.955
ENSENLP00000045346
Katanin p60 (ATPase containing) subunit A 1.
   
 
 0.955
ENSENLP00000005668
Abnormal spindle microtubule assembly.
    
 
 0.935
ENSENLP00000011003
Katanin p80 subunit B-like 1.
    
 
 0.913
ENSENLP00000033291
annotation not available
    
 
 0.913
pfdn4
Prefoldin subunit 4.
    
   0.911
pfdn2
Prefoldin subunit 2.
    
   0.824
pfdn1
Prefoldin subunit 1.
    
   0.769
kiaa0556
KIAA0556 ortholog.
    
 
 0.751
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.