STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000009188Retinoblastoma-like 1 (p107). (1062 aa)    
Predicted Functional Partners:
tfdp1
Transcription factor Dp-1.
   
 0.991
e2f4
E2F transcription factor 4.
   
 0.979
ENSENLP00000038526
Lin-52 DREAM MuvB core complex component.
    
 0.972
CCNE2
Cyclin E2.
   
 0.969
ENSENLP00000012863
Cyclin E2.
   
 0.969
ENSENLP00000041560
Cyclin E1.
   
 0.969
LOC115056982
G1/S-specific cyclin-D2-like.
    
 0.964
ccnd1
Cyclin D1.
    
 0.964
LOC115036988
G1/S-specific cyclin-D2-like.
    
 0.964
ENSENLP00000041077
annotation not available
    
 0.964
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.