STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdlim1PDZ and LIM domain 1. (320 aa)    
Predicted Functional Partners:
ENSENLP00000016310
LIM domain binding 3a.
   
 
0.835
pdlim4
PDZ and LIM domain 4.
     
0.816
ehbp1
EH domain binding protein 1.
   
 0.798
ENSENLP00000015633
annotation not available
   
 0.798
ENSENLP00000044914
annotation not available
   
 0.798
myo3b
Myosin IIIB.
    
  0.797
ENSENLP00000051828
Myosin IIIA.
    
  0.797
LOC115051891
ARF GTPase-activating protein GIT2-like.
    
 0.781
ENSENLP00000018853
G protein-coupled receptor kinase interacting ArfGAP 1.
    
 0.781
git2
GIT ArfGAP 2.
    
 0.781
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.