Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC115047579Retinol dehydrogenase 8-like. (317 aa)    
Predicted Functional Partners:
LOC115048715
Lecithin retinol acyltransferase-like.
   
 0.940
ENSENLP00000020419
Hydroxysteroid (20-beta) dehydrogenase 2.
 
 
 0.917
ENSENLP00000026087
Cytochrome P450, family 11, subfamily C, polypeptide 1.
  
 
 0.897
LOC115056007
Cholesterol side-chain cleavage enzyme, mitochondrial.
  
 
 0.897
aldh1a3
Aldehyde dehydrogenase 1 family member A3.
  
 0.896
aldh1a2
Aldehyde dehydrogenase 1 family member A2.
  
 0.896
ENSENLP00000040900
Cytochrome P450, family 27, subfamily C, polypeptide 1.
  
 
 0.896
ENSENLP00000014187
Lecithin retinol acyltransferase b, tandem duplicate 1.
     
 0.893
LOC115059240
Lecithin retinol acyltransferase-like.
   
  0.893
LOC115061035
Beta,beta-carotene 15,15'-dioxygenase-like.
   
 
 0.892
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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