STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115047579Retinol dehydrogenase 8-like. (317 aa)    
Predicted Functional Partners:
aox1
Aldehyde oxidase 1.
   
 
 0.919
ENSENLP00000040900
Cytochrome P450, family 27, subfamily C, polypeptide 1.
  
 
 0.919
ENSENLP00000052990
Cytochrome P450, family 26, subfamily A, polypeptide 1.
  
 
 0.919
LOC115048715
Lecithin retinol acyltransferase-like.
   
 0.884
ENSENLP00000014187
Lecithin retinol acyltransferase b, tandem duplicate 1.
     
 0.839
ENSENLP00000020419
Hydroxysteroid (20-beta) dehydrogenase 2.
 
 
 0.838
LOC115059240
Lecithin retinol acyltransferase-like.
   
 0.837
aldh1a3
Aldehyde dehydrogenase 1 family member A3.
  
 0.832
aldh1a2
Aldehyde dehydrogenase 1 family member A2.
  
 0.832
retsat
Retinol saturase.
    
 0.828
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.