STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
samd4bSterile alpha motif domain containing 4B. (677 aa)    
Predicted Functional Partners:
ENSENLP00000010590
Nanos homolog 1.
    
 
 0.821
LOC115036003
Nanos homolog 1-like.
    
 
 0.821
LOC115053797
14-3-3 protein epsilon.
    
   0.792
LOC115052568
14-3-3 protein epsilon-like.
    
   0.792
LOC115050209
CCR4-NOT transcription complex subunit 6.
    
 
 0.760
cnot6l
CCR4-NOT transcription complex subunit 6 like.
    
 
 0.760
LOC115047424
Calcium-regulated heat stable protein 1-like.
    
 
 0.649
golga3
Golgin A3.
      
 0.648
rnpc3
RNA binding region (RNP1, RRM) containing 3.
      
 0.624
zc3h15
Zinc finger CCCH-type containing 15.
   
   0.601
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.