Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115055488Homeobox protein Hox-D4b-like. (253 aa)    
Predicted Functional Partners:
ENSENLP00000054117
Homeobox C6a.
   
 
 0.849
LOC115047028
Homeobox protein Hox-B6a-like.
   
 
 0.841
hoxc5
Homeobox C5.
   
 
 0.810
LOC115058296
pre-B-cell leukemia transcription factor 1-like.
    
 0.725
LOC115045058
pre-B-cell leukemia transcription factor 1-like.
    
 0.725
LOC115047618
pre-B-cell leukemia transcription factor 1-like.
    
 0.725
ENSENLP00000044913
annotation not available
    
 0.725
LOC115041872
pre-B-cell leukemia transcription factor 1.
    
 0.725
pbx3
PBX homeobox 3.
    
 0.725
hoxd4
Homeobox D4.
   
 
 0.725
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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