ENSENLP00000010034 protein (Echeneis naucrates)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSENLP00000010034

annotation not available (90 aa)

Predicted Functional Partners:

hoxc9

0.912

hoxd10

0.773

ENSENLP00000054113

0.714

hoxa9

0.655

LOC115052950

0.525

LOC115055109

0.508

meis2

0.508

LOC115062019

0.410

ENSENLP00000017196

0.405

LOC115050698

0.405

Your Current Organism:

Echeneis naucrates

NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSENLP00000010034	ENSENLP00000017196	ENSENLP00000010034	ENSENLP00000017196	annotation not available	Homeobox A11b.	0.405
ENSENLP00000010034	ENSENLP00000054113	ENSENLP00000010034	ENSENLP00000054113	annotation not available	Homeobox C10a.	0.714
ENSENLP00000010034	LOC115050698	ENSENLP00000010034	ENSENLP00000043372	annotation not available	Homeobox protein Hox-A11a.	0.405
ENSENLP00000010034	LOC115052950	ENSENLP00000010034	ENSENLP00000046473	annotation not available	T-box transcription factor TBX4-like.	0.525
ENSENLP00000010034	LOC115055109	ENSENLP00000010034	ENSENLP00000008607	annotation not available	Homeobox protein Meis1.	0.508
ENSENLP00000010034	LOC115062019	ENSENLP00000010034	ENSENLP00000049500	annotation not available	Homeobox protein Hox-D11a-like.	0.410
ENSENLP00000010034	hoxa9	ENSENLP00000010034	ENSENLP00000043366	annotation not available	Homeobox A9.	0.655
ENSENLP00000010034	hoxc9	ENSENLP00000010034	ENSENLP00000054115	annotation not available	Homeobox C9.	0.912
ENSENLP00000010034	hoxd10	ENSENLP00000010034	ENSENLP00000049505	annotation not available	Homeobox D10.	0.773
ENSENLP00000010034	meis2	ENSENLP00000010034	ENSENLP00000042330	annotation not available	Meis homeobox 2.	0.508
ENSENLP00000017196	ENSENLP00000010034	ENSENLP00000017196	ENSENLP00000010034	Homeobox A11b.	annotation not available	0.405
ENSENLP00000017196	ENSENLP00000054113	ENSENLP00000017196	ENSENLP00000054113	Homeobox A11b.	Homeobox C10a.	0.515
ENSENLP00000017196	LOC115055109	ENSENLP00000017196	ENSENLP00000008607	Homeobox A11b.	Homeobox protein Meis1.	0.528
ENSENLP00000017196	hoxc9	ENSENLP00000017196	ENSENLP00000054115	Homeobox A11b.	Homeobox C9.	0.453
ENSENLP00000017196	hoxd10	ENSENLP00000017196	ENSENLP00000049505	Homeobox A11b.	Homeobox D10.	0.485
ENSENLP00000017196	meis2	ENSENLP00000017196	ENSENLP00000042330	Homeobox A11b.	Meis homeobox 2.	0.528
ENSENLP00000054113	ENSENLP00000010034	ENSENLP00000054113	ENSENLP00000010034	Homeobox C10a.	annotation not available	0.714
ENSENLP00000054113	ENSENLP00000017196	ENSENLP00000054113	ENSENLP00000017196	Homeobox C10a.	Homeobox A11b.	0.515
ENSENLP00000054113	LOC115050698	ENSENLP00000054113	ENSENLP00000043372	Homeobox C10a.	Homeobox protein Hox-A11a.	0.515
ENSENLP00000054113	LOC115062019	ENSENLP00000054113	ENSENLP00000049500	Homeobox C10a.	Homeobox protein Hox-D11a-like.	0.515