Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115044523Cellular retinoic acid-binding protein 2-like. (142 aa)    
Predicted Functional Partners:
ENSENLP00000014648
Transthyretin (prealbumin, amyloidosis type I).
   
 
 0.703
tuft1
Tuftelin 1.
      
 0.687
LOC115058152
Gastrotropin-like.
   
 
 0.683
ENSENLP00000052990
Cytochrome P450, family 26, subfamily A, polypeptide 1.
     
 0.678
fabp1
Fatty acid binding protein 1.
     
 0.647
FABP6
Gastrotropin-like.
     
 0.627
ift80
Intraflagellar transport 80.
     
 0.618
fzd6
Frizzled class receptor 6.
      
 0.615
LOC115046317
Fatty acid-binding protein, intestinal-like.
     
 0.606
LOC115058935
Fatty acid-binding protein, intestinal-like.
     
 0.606
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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