Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nkapd1NKAP domain containing 1. (256 aa)    
Predicted Functional Partners:
ENSENLP00000042852
Pinin, desmosome associated protein.
    
   0.807
rp9
RP9 pre-mRNA splicing factor.
   
   0.805
syf2
SYF2 pre-mRNA splicing factor.
    
   0.784
srek1ip1
SREK1 interacting protein 1.
    
   0.784
dhx34
DExH-box helicase 34.
   
   0.751
ENSENLP00000044454
DEAH (Asp-Glu-Ala-His) box polypeptide 8.
   
   0.751
c9h9orf78
Chromosome 9 C9orf78 homolog.
    
   0.750
FAM133B
Family with sequence similarity 133 member B.
    
   0.641
ENSENLP00000030090
annotation not available
    
   0.618
LOC115050847
Casein kinase II subunit beta.
    
   0.618
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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