STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115049427Lysine-specific demethylase 2B-like. (779 aa)    
Predicted Functional Partners:
ENSENLP00000049820
S-phase kinase-associated protein 1.
   
 0.999
RING1
Ring finger protein 1.
    
 0.992
rnf2
Ring finger protein 2.
    
 0.992
LOC115036836
YY1-associated factor 2-like.
    
 0.985
rybp
RING1 and YY1 binding protein.
    
 0.985
YAF2
YY1-associated factor 2-like.
    
 0.985
PCGF3
Polycomb group ring finger 3.
   
 0.969
pcgf1
Polycomb group ring finger 1.
   
 0.967
pcgf6
Polycomb group ring finger 6.
   
 0.967
pcgf2
Polycomb group ring finger 2.
   
 0.967
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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