Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115052564dixin-A-like. (462 aa)    
Predicted Functional Partners:
ENSENLP00000004914
annotation not available
    
 
 0.740
ndel1
nudE neurodevelopment protein 1 like 1.
    
 
 0.740
NDE1
nudE neurodevelopment protein 1.
    
 
 0.740
LOC115059811
Nuclear distribution protein nudE-like 1-B.
    
 
 0.740
cdk12
Cyclin dependent kinase 12.
    
 
 0.570
cdk13
Cyclin dependent kinase 13.
    
 
 0.570
ENSENLP00000016183
Ubiquitin specific peptidase 1.
   
  
 0.522
phf11
PHD finger protein 11.
    
 0.505
phf6
PHD finger protein 6.
    
 0.505
ALYREF
Aly/REF export factor.
   
   0.500
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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