STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ercc4ERCC excision repair 4, endonuclease catalytic subunit. (896 aa)    
Predicted Functional Partners:
ercc1
ERCC excision repair 1, endonuclease non-catalytic subunit.
   
 0.999
ENSENLP00000008224
Xeroderma pigmentosum, complementation group A.
    
 0.997
slx4
SLX4 structure-specific endonuclease subunit.
  
 0.997
msh2
mutS homolog 2.
    
 0.992
ENSENLP00000005495
DNA topoisomerase III alpha.
    
 0.990
nars1
asparaginyl-tRNA synthetase 1.
  
 0.988
ENSENLP00000011449
annotation not available
   
 0.986
ENSENLP00000051534
FA complementation group C.
   
 0.986
faap24
FA core complex associated protein 24.
   
 0.985
fancl
FA complementation group L.
    
 0.985
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.