STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ercc4ERCC excision repair 4, endonuclease catalytic subunit. (896 aa)    
Predicted Functional Partners:
ENSENLP00000008224
Xeroderma pigmentosum, complementation group A.
    
 0.999
ercc1
ERCC excision repair 1, endonuclease non-catalytic subunit.
   
 0.999
slx4
SLX4 structure-specific endonuclease subunit.
  
 0.996
ercc3
ERCC excision repair 3, TFIIH core complex helicase subunit.
  
 0.995
ercc2
ERCC excision repair 2, TFIIH core complex helicase subunit.
   
 0.991
mus81
MUS81 structure-specific endonuclease subunit.
    
 0.987
ENSENLP00000005495
DNA topoisomerase III alpha.
    
 0.984
fancg
FA complementation group G.
    
 0.984
fancf
FA complementation group F.
    
 0.983
ENSENLP00000051534
FA complementation group C.
   
 0.983
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.