STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000010075Lactate dehydrogenase A4. (383 aa)    
Predicted Functional Partners:
cs
Citrate synthase.
  
 0.974
got2
Glutamic-oxaloacetic transaminase 2.
   
 0.964
pdhb
Pyruvate dehydrogenase E1 beta subunit.
  
 0.961
ENSENLP00000011134
Pyruvate kinase M1/2b.
  
 0.954
LOC115044750
Pyruvate kinase PKM-like.
  
 0.954
ENSENLP00000051072
Pyruvate kinase M1/2a.
  
 0.954
LOC115049622
Malate synthase, glyoxysomal-like.
  
 0.952
pc
Pyruvate carboxylase.
  
 0.949
LOC115056995
Glucose-6-phosphate isomerase-like.
  
 0.946
LOC115040684
Glucose-6-phosphate isomerase-like.
  
 0.946
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.