STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115053893Solute carrier family 35 member F2-like. (406 aa)    
Predicted Functional Partners:
retreg3
Reticulophagy regulator family member 3.
    
   0.745
pomk
Protein O-mannose kinase.
    
   0.733
ggps1
Geranylgeranyl diphosphate synthase 1.
   
  0.713
dhdds
Dehydrodolichyl diphosphate synthase subunit.
  
 
 0.708
fnta
Farnesyltransferase, CAAX box, alpha.
     
  0.703
fdft1
Farnesyl-diphosphate farnesyltransferase 1.
     
  0.683
LOC115038313
Protein farnesyltransferase subunit beta-like.
     
  0.638
churc1
Churchill domain containing 1.
     
  0.638
pdss2
Decaprenyl diphosphate synthase subunit 2.
   
  0.631
pdss1
Decaprenyl diphosphate synthase subunit 1.
   
  0.631
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.