TOMM7 protein (Echeneis naucrates) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

TOMM7

Translocase of outer mitochondrial membrane 7. (55 aa)

Predicted Functional Partners:

tomm5

0.999

tomm22

0.999

tomm70

0.998

tomm6

0.998

LOC115038950

0.995

TOMM20

0.995

pink1

0.991

ENSENLP00000048132

0.990

ENSENLP00000021257

0.988

LOC115050646

0.988

Your Current Organism:

Echeneis naucrates

NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSENLP00000021257	ENSENLP00000048132	ENSENLP00000021257	ENSENLP00000048132	annotation not available	annotation not available	0.854
ENSENLP00000021257	LOC115038950	ENSENLP00000021257	ENSENLP00000001912	annotation not available	Mitochondrial import receptor subunit TOM20 homolog.	0.976
ENSENLP00000021257	LOC115050646	ENSENLP00000021257	ENSENLP00000036856	annotation not available	Mitochondrial import receptor subunit TOM40 homolog.	0.879
ENSENLP00000021257	TOMM20	ENSENLP00000021257	ENSENLP00000043700	annotation not available	Mitochondrial import receptor subunit TOM20 homolog.	0.976
ENSENLP00000021257	TOMM7	ENSENLP00000021257	ENSENLP00000010281	annotation not available	Translocase of outer mitochondrial membrane 7.	0.988
ENSENLP00000021257	pink1	ENSENLP00000021257	ENSENLP00000022830	annotation not available	PTEN induced kinase 1.	0.975
ENSENLP00000021257	tomm22	ENSENLP00000021257	ENSENLP00000015953	annotation not available	Translocase of outer mitochondrial membrane 22.	0.975
ENSENLP00000021257	tomm5	ENSENLP00000021257	ENSENLP00000005266	annotation not available	Translocase of outer mitochondrial membrane 5.	0.931
ENSENLP00000021257	tomm6	ENSENLP00000021257	ENSENLP00000032029	annotation not available	Translocase of outer mitochondrial membrane 6.	0.925
ENSENLP00000021257	tomm70	ENSENLP00000021257	ENSENLP00000023747	annotation not available	Translocase of outer mitochondrial membrane 70.	0.985
ENSENLP00000048132	ENSENLP00000021257	ENSENLP00000048132	ENSENLP00000021257	annotation not available	annotation not available	0.854
ENSENLP00000048132	LOC115038950	ENSENLP00000048132	ENSENLP00000001912	annotation not available	Mitochondrial import receptor subunit TOM20 homolog.	0.940
ENSENLP00000048132	LOC115050646	ENSENLP00000048132	ENSENLP00000036856	annotation not available	Mitochondrial import receptor subunit TOM40 homolog.	0.854
ENSENLP00000048132	TOMM20	ENSENLP00000048132	ENSENLP00000043700	annotation not available	Mitochondrial import receptor subunit TOM20 homolog.	0.940
ENSENLP00000048132	TOMM7	ENSENLP00000048132	ENSENLP00000010281	annotation not available	Translocase of outer mitochondrial membrane 7.	0.990
ENSENLP00000048132	pink1	ENSENLP00000048132	ENSENLP00000022830	annotation not available	PTEN induced kinase 1.	0.877
ENSENLP00000048132	tomm5	ENSENLP00000048132	ENSENLP00000005266	annotation not available	Translocase of outer mitochondrial membrane 5.	0.945
ENSENLP00000048132	tomm6	ENSENLP00000048132	ENSENLP00000032029	annotation not available	Translocase of outer mitochondrial membrane 6.	0.936
ENSENLP00000048132	tomm70	ENSENLP00000048132	ENSENLP00000023747	annotation not available	Translocase of outer mitochondrial membrane 70.	0.968
LOC115038950	ENSENLP00000021257	ENSENLP00000001912	ENSENLP00000021257	Mitochondrial import receptor subunit TOM20 homolog.	annotation not available	0.976