STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mterf3Mitochondrial transcription termination factor 3. (426 aa)    
Predicted Functional Partners:
ENSENLP00000008948
FAST kinase domains 2.
   
 
 0.843
ENSENLP00000018092
Mitochondrial ribosomal protein L36.
    
 
 0.768
mrpl20
Mitochondrial ribosomal protein L20.
    
 
 0.765
ddx28
DEAD-box helicase 28.
    
 
 0.718
rpl23a
Ribosomal protein L23a.
    
   0.713
ykt6
YKT6 v-SNARE homolog.
     
 0.707
mrrf
Mitochondrial ribosome recycling factor.
    
 
 0.676
ENSENLP00000050357
Mitochondrial ribosomal protein L19.
   
 
 0.675
pink1
PTEN induced kinase 1.
     
 0.646
slirp
SRA stem-loop interacting RNA binding protein.
    
 
 0.644
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.