STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115055239Sideroflexin-1-like. (322 aa)    
Predicted Functional Partners:
rab11a
RAB11A, member RAS oncogene family.
    
 0.653
LOC115041789
Ras-related protein Rab-11B-like.
    
 0.653
LOC115041662
Ras-related protein Rab-11B.
    
 0.653
LOC115045395
Ras-related protein Rab-11A-like.
    
 0.653
LOC115057175
Ras-related protein Rab-11B-like.
    
 0.653
LOC115050734
Ras-related protein Rab-25-like.
    
 0.613
rab25
RAB25, member RAS oncogene family.
    
 0.613
ENSENLP00000023209
RAB, member of RAS oncogene family-like 2.
    
  0.579
ENSENLP00000014996
RUNX1 partner transcriptional co-repressor 1.
   
    0.562
cbfa2t3
CBFA2/RUNX1 partner transcriptional co-repressor 3.
   
    0.562
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.