Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ATE1Arginyltransferase 1. (513 aa)    
Predicted Functional Partners:
ENSENLP00000033977
annotation not available
    
   0.769
LOC115054480
Vacuolar protein sorting-associated protein 26B-like.
    
   0.735
vps26b
VPS26, retromer complex component B.
    
   0.735
ntan1
N-terminal asparagine amidase.
    
 
 0.733
UBR1
Ubiquitin protein ligase E3 component n-recognin 1.
   
 
 0.711
ENSENLP00000048384
Ubiquitin protein ligase E3 component n-recognin 2.
   
 
 0.711
gask1b
Golgi associated kinase 1B.
      
 0.706
ENSENLP00000054584
Eukaryotic translation initiation factor 1.
      
 0.675
ENSENLP00000019912
Signal peptidase complex subunit 2.
      
 0.667
ENSENLP00000021310
Ubiquitin protein ligase E3 component n-recognin 4.
      
 0.638
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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