Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
snapc5Small nuclear RNA activating complex polypeptide 5. (124 aa)    
Predicted Functional Partners:
ENSENLP00000038604
annotation not available
    
 0.998
snapc3
Small nuclear RNA activating complex polypeptide 3.
    
 0.998
LOC115050367
snRNA-activating protein complex subunit 1-like.
    
 0.988
snapc1
Small nuclear RNA activating complex polypeptide 1.
    
 0.988
gtf2b
General transcription factor IIB.
    
 0.951
gtf2a1
General transcription factor IIA subunit 1.
    
  0.918
polr2l
RNA polymerase II subunit L.
   
  0.912
polr2k
RNA polymerase II subunit K.
    
  0.909
polr2i
RNA polymerase II subunit I.
   
  0.903
gtf2f1
General transcription factor IIF subunit 1.
    
  0.894
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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