Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ube3bUbiquitin protein ligase E3B. (1068 aa)    
Predicted Functional Partners:
DLK1
Delta like non-canonical Notch ligand 1.
    
   0.762
pudp
Pseudouridine 5'-phosphatase.
      
 0.672
ENSENLP00000000057
SDE2 telomere maintenance homolog (S. pombe).
      
 0.664
rps27a
Ribosomal protein S27a.
    
  0.651
ENSENLP00000047345
Thyroid hormone receptor interactor 12.
      
 0.641
gart
annotation not available
      
 0.639
ndufaf7
NADH:ubiquinone oxidoreductase complex assembly factor 7.
      
 0.634
rchy1
Ring finger and CHY zinc finger domain containing 1.
      
 0.611
uba5
Ubiquitin like modifier activating enzyme 5.
     
 0.596
atg7
Autophagy related 7.
     
  0.590
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.