STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
smad6SMAD family member 6. (490 aa)    
Predicted Functional Partners:
ENSENLP00000010369
SMAD specific E3 ubiquitin protein ligase 1.
    
 0.980
LOC115047311
E3 ubiquitin-protein ligase SMURF2.
    
 0.980
LOC115044607
E3 ubiquitin-protein ligase SMURF2-like.
    
 0.980
LOC115050019
Mothers against decapentaplegic homolog 5.
   
0.947
ENSENLP00000013012
SMAD family member 1.
   
0.947
smad9
SMAD family member 9.
   
0.947
smad3
SMAD family member 3.
   
0.945
LOC115040841
Mothers against decapentaplegic homolog 3.
   
0.945
LOC115048648
Mothers against decapentaplegic homolog 2.
   
0.945
smad2
SMAD family member 2.
   
0.937
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.