Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115050996RNA-binding protein 24. (232 aa)    
Predicted Functional Partners:
LOC115044590
RNA binding protein fox-1 homolog 1-like.
  
 
 0.773
ENSENLP00000037825
annotation not available
  
 
 0.738
LOC115040545
RNA binding protein fox-1 homolog 2-like.
   
 
 0.635
sf3b1
Splicing factor 3b subunit 1.
     
 0.623
sf3b4
Splicing factor 3b subunit 4.
     
 0.619
sf3b5
Splicing factor 3b subunit 5.
     
 0.612
ddx42
DEAD-box helicase 42.
    
  0.607
phf5a
PHD finger protein 5A.
     
  0.605
sf3b3
Splicing factor 3b subunit 3.
     
  0.605
ENSENLP00000049286
Splicing factor 3b, subunit 2.
     
  0.605
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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