STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paxxPAXX non-homologous end joining factor. (231 aa)    
Predicted Functional Partners:
lig4
DNA ligase 4.
    
 0.964
xrcc6
X-ray repair cross complementing 6.
    
 
 0.964
xrcc5
X-ray repair cross complementing 5.
    
 
 0.956
ENSENLP00000049703
Protein kinase, DNA-activated, catalytic subunit.
    
 
 0.914
nhej1
Non-homologous end joining factor 1.
    
 0.913
ENSENLP00000003151
annotation not available
    
 0.904
poll
DNA polymerase lambda.
    
 
 0.874
LOC115052467
DNA repair protein XRCC4-like.
     
 0.839
rbx1
Ring-box 1.
      
 0.837
hus1
HUS1 checkpoint clamp component.
      
 0.734
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.