STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000010616annotation not available (705 aa)    
Predicted Functional Partners:
LOC115050911
Cytoplasmic dynein 1 light intermediate chain 1-like.
    
  0.813
dync1li2
Dynein cytoplasmic 1 light intermediate chain 2.
    
  0.813
LOC115054444
Rab proteins geranylgeranyltransferase component A 1-like.
    
 0.803
c9orf72
C9orf72-SMCR8 complex subunit.
    
  0.780
rabggtb
Rab geranylgeranyltransferase subunit beta.
    
 0.780
ENSENLP00000011562
Sequestosome 1.
    
 0.737
LOC115056505
Guanine nucleotide exchange factor for Rab-3A-like.
    
 0.735
rab3ip
RAB3A interacting protein.
    
 0.735
exoc4
Exocyst complex component 4.
    
 0.698
exoc1
Exocyst complex component 1.
   
 0.697
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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