STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000010715Ryanodine receptor 3. (4855 aa)    
Predicted Functional Partners:
LOC115054180
Calsequestrin-2-like.
   
 0.940
LOC115061771
Calsequestrin-2-like.
   
 0.940
LOC115057515
Calsequestrin-1-like.
   
 0.940
LOC115061043
ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1-like.
     
 0.913
ENSENLP00000052464
annotation not available
     
 0.913
asph
Aspartate beta-hydroxylase.
   
 
 0.890
LOC115057873
Fibrous sheath CABYR-binding protein-like.
   
 
 0.889
CALML6
Calmodulin like 6.
    
 0.869
ENSENLP00000034433
Calmodulin-like 4b.
    
 0.869
calm2
Calmodulin.
    
 0.855
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.