Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
imp3IMP U3 small nucleolar ribonucleoprotein 3. (194 aa)    
Predicted Functional Partners:
mphosph10
M-phase phosphoprotein 10.
   
  0.999
ENSENLP00000023824
IMP U3 small nucleolar ribonucleoprotein 4.
   
 0.999
utp3
UTP3 small subunit processome component.
   
 0.997
wdr46
WD repeat domain 46.
   
 0.996
rps7
Ribosomal protein S7.
   
 0.996
rrp7a
Ribosomal RNA processing 7 homolog A.
   
 0.996
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.996
noc4l
Nucleolar complex associated 4 homolog.
   
 0.996
utp4
UTP4 small subunit processome component.
   
 0.994
ENSENLP00000041091
FCF1 rRNA-processing protein.
   
 0.994
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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