Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ccdc9Coiled-coil domain containing 9. (699 aa)    
Predicted Functional Partners:
eif4a3
Eukaryotic translation initiation factor 4A3.
   
   0.974
ENSENLP00000042852
Pinin, desmosome associated protein.
    
   0.864
ENSENLP00000009638
Nuclear cap binding subunit 3.
    
   0.826
thoc7
THO complex 7.
    
   0.805
LOC115042365
Protein mago nashi homolog.
    
   0.755
sarnp
SAP domain containing ribonucleoprotein.
    
   0.753
ENSENLP00000049404
Si:ch211-243o19.4.
    
 
 0.724
ccdc113
Coiled-coil domain containing 113.
    
 
 0.720
SNIP1
Smad nuclear interacting protein 1.
    
   0.715
ENSENLP00000051213
annotation not available
    
 
 0.690
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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