STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
znhit1Zinc finger HIT-type containing 1. (156 aa)    
Predicted Functional Partners:
vps72
Vacuolar protein sorting 72 homolog.
    
 
 0.990
actr6
Actin related protein 6.
   
 
 0.990
ruvbl1
RuvB like AAA ATPase 1.
    
 
 0.989
ruvbl2
RuvB like AAA ATPase 2.
    
 
 0.989
yeats4
YEATS domain containing 4.
   
 
 0.989
dmap1
DNA methyltransferase 1 associated protein 1.
   
 
 0.986
cfdp1
Craniofacial development protein 1.
    
 
 0.956
actl6a
Actin like 6A.
    
 
 0.956
ENSENLP00000002586
Nuclear factor of activated T cells 2 interacting protein.
   
   0.936
ENSENLP00000037262
Snf2-related CREBBP activator protein.
    
 
 0.930
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.