Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000010995LIM homeobox 4. (352 aa)    
Predicted Functional Partners:
ISL2
Insulin gene enhancer protein ISL-3.
    
 0.881
ENSENLP00000032594
ISL LIM homeobox 2b.
    
 0.881
ENSENLP00000035391
ISL LIM homeobox 1.
    
 0.881
LOC115049668
LIM domain-binding protein 2.
    
 0.847
LOC115055442
LIM domain-binding protein 1-A-like.
    
 0.847
LOC115044302
LIM domain-binding protein 1.
    
 0.847
ALX3
ALX homeobox 3.
    
 0.818
ENSENLP00000005520
Si:ch211-130m23.3.
    
 
 0.756
LOC115036407
Single-stranded DNA-binding protein 3-like.
    
 
 0.756
LOC115041637
Single-stranded DNA-binding protein 3-like.
    
 
 0.756
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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