Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tada2bTranscriptional adaptor 2B. (493 aa)    
Predicted Functional Partners:
taf10
TATA-box binding protein associated factor 10.
    
 0.999
tada3
Transcriptional adaptor 3.
    
 0.999
ENSENLP00000046062
Transformation/transcription domain-associated protein.
    
 0.999
ENSENLP00000025087
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.998
sgf29
SAGA complex associated factor 29.
    
 0.998
supt3h
SPT3 homolog, SAGA and STAGA complex component.
    
 0.997
supt7l
SPT7 like, STAGA complex gamma subunit.
    
 0.997
ENSENLP00000032831
SPT20 homolog, SAGA complex component.
    
 0.996
LOC115058914
TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L.
    
 0.996
ENSENLP00000000697
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.995
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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