Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
spty2d1SPT2 chromatin protein domain containing 1. (693 aa)    
Predicted Functional Partners:
LOC115056408
Ubiquitin-conjugating enzyme E2 variant 3-like.
  
 
 0.902
rrp8
Ribosomal RNA processing 8.
    
 
 0.848
arpc2
Actin related protein 2/3 complex subunit 2.
   
 0.815
nifk
Nucleolar protein interacting with the FHA domain of MKI67.
    
   0.790
arpc3
Actin related protein 2/3 complex subunit 3.
    
 0.790
ENSENLP00000054153
USO1 vesicle transport factor.
   
 0.776
ENSENLP00000007121
WASP like actin nucleation promoting factor b.
   
 0.773
ENSENLP00000014178
WASP like actin nucleation promoting factor a.
   
 0.773
LOC115045767
wiskott-Aldrich syndrome protein-like.
   
 0.773
LOC115047331
elongin-B-like.
    
 0.751
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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