STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000011409Phosphodiesterase 1A, calmodulin-dependent. (531 aa)    
Predicted Functional Partners:
CALML6
Calmodulin like 6.
    
 0.932
LOC115037593
Ectonucleotide pyrophosphatase/phosphodiesterase family member 1-like.
     
 0.921
aprt
Adenine phosphoribosyltransferase.
     
 0.920
ak3
Adenylate kinase 3.
     
 0.916
adsl
Adenylosuccinate lyase.
     
 0.915
calm2
Calmodulin.
    
 0.898
calm3
Calmodulin.
    
 0.898
ENSENLP00000037696
Calmodulin 1b.
    
 0.898
calm3-2
Calmodulin.
    
 0.898
ENSENLP00000046858
annotation not available
     
 0.855
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.