STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
top3bDNA topoisomerase III beta. (860 aa)    
Predicted Functional Partners:
ENSENLP00000024951
annotation not available
   
 0.999
tdrd3
Tudor domain containing 3.
    
 0.994
ENSENLP00000030869
RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae).
    
 0.992
blm
BLM RecQ like helicase.
  
 0.989
ENSENLP00000005978
RecQ helicase-like 4.
  
 0.976
rpa3
Replication protein A3.
    
 0.975
rmi2
RecQ mediated genome instability 2.
    
 0.972
recql5
RecQ like helicase 5.
  
 0.970
ercc4
ERCC excision repair 4, endonuclease catalytic subunit.
    
 0.961
mus81
MUS81 structure-specific endonuclease subunit.
    
 0.951
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.