Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ferFER tyrosine kinase. (826 aa)    
Predicted Functional Partners:
ctnnb1
Catenin beta 1.
    
 0.937
LOC115050787
Catenin beta-1-like.
    
  0.918
LOC115043973
Macrophage-stimulating protein receptor-like.
    
 0.903
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.903
mst1r
Macrophage stimulating 1 receptor.
    
 0.903
YES1
YES proto-oncogene 1, Src family tyrosine kinase.
   
  0.896
LOC115057129
Tyrosine-protein kinase Yes.
   
  0.896
ctnnd1
Catenin delta 1.
    
 0.895
LOC115058267
Catenin delta-1-like.
    
 0.895
ARVCF
ARVCF delta catenin family member.
    
 0.833
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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