STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000011571Bicaudal D homolog 1a. (931 aa)    
Predicted Functional Partners:
dctn2
Dynactin subunit 2.
    
 0.924
LOC115059013
Dynactin subunit 1-like.
    
 0.883
LOC115035361
Dynactin subunit 1-like.
    
 0.883
LOC115050911
Cytoplasmic dynein 1 light intermediate chain 1-like.
    
 0.862
dync1li2
Dynein cytoplasmic 1 light intermediate chain 2.
    
 0.862
ENSENLP00000037372
Exonuclease 3'-5' domain containing 1.
    
 
 0.796
rab41
RAB41, member RAS oncogene family.
    
 0.794
LOC115054087
Ras-related protein Rab-6A.
    
 0.794
ENSENLP00000019971
RAB6B, member RAS oncogene family a.
    
 0.794
ENSENLP00000021429
RAB6B, member RAS oncogene family b.
    
 0.794
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.