Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ascc2Activating signal cointegrator 1 complex subunit 2. (754 aa)    
Predicted Functional Partners:
trip4
Thyroid hormone receptor interactor 4.
   
 0.999
ascc3
Activating signal cointegrator 1 complex subunit 3.
    
 0.999
ascc1
Activating signal cointegrator 1 complex subunit 1.
    
 0.998
ENSENLP00000018405
Helicase for meiosis 1.
    
 0.963
ENSENLP00000004347
Ubiquitin B.
   
  0.936
akap7
A-kinase anchoring protein 7.
    
 0.918
znf598
Zinc finger protein 598.
    
 0.869
snrnp200
Small nuclear ribonucleoprotein U5 subunit 200.
    
 0.867
rps3
Ribosomal protein S3.
    
 
 0.863
rps10
Ribosomal protein S10.
    
 
 0.851
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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