Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bivmBasic, immunoglobulin-like variable motif containing. (508 aa)    
Predicted Functional Partners:
ercc6
ERCC excision repair 6, chromatin remodeling factor.
  
 0.974
ercc3
ERCC excision repair 3, TFIIH core complex helicase subunit.
   
 0.973
ercc2
ERCC excision repair 2, TFIIH core complex helicase subunit.
  
 0.968
ENSENLP00000008224
Xeroderma pigmentosum, complementation group A.
    
 0.965
ercc4
ERCC excision repair 4, endonuclease catalytic subunit.
   
 0.954
ENSENLP00000024951
annotation not available
   
 0.947
ENSENLP00000019785
General transcription factor IIH, polypeptide 1.
    
 0.945
ercc1
ERCC excision repair 1, endonuclease non-catalytic subunit.
    
 0.945
mus81
MUS81 structure-specific endonuclease subunit.
   
 0.932
LOC115048985
General transcription factor IIH subunit 2-like.
    
 0.929
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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