ENSENLP00000011643 protein (Echeneis naucrates)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSENLP00000011643

Proteasome 26S subunit, non-ATPase 2. (911 aa)

Predicted Functional Partners:

psmc2

0.999

psmd6

0.999

ENSENLP00000016947

0.999

psmc3

0.999

ENSENLP00000021857

0.999

psmc4

0.999

LOC115044433

0.999

psmd12

0.999

psmd8

0.999

psmd13

0.999

Your Current Organism:

Echeneis naucrates

NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSENLP00000011643	ENSENLP00000016947	ENSENLP00000011643	ENSENLP00000016947	Proteasome 26S subunit, non-ATPase 2.	Proteasome 26S subunit, non-ATPase 7.	0.999
ENSENLP00000011643	ENSENLP00000021857	ENSENLP00000011643	ENSENLP00000021857	Proteasome 26S subunit, non-ATPase 2.	Proteasome 26S subunit, non-ATPase 1.	0.999
ENSENLP00000011643	LOC115044433	ENSENLP00000011643	ENSENLP00000024789	Proteasome 26S subunit, non-ATPase 2.	26S proteasome non-ATPase regulatory subunit 4-like.	0.999
ENSENLP00000011643	psmc2	ENSENLP00000011643	ENSENLP00000008133	Proteasome 26S subunit, non-ATPase 2.	Proteasome 26S subunit, ATPase 2.	0.999
ENSENLP00000011643	psmc3	ENSENLP00000011643	ENSENLP00000017290	Proteasome 26S subunit, non-ATPase 2.	Proteasome 26S subunit, ATPase 3.	0.999
ENSENLP00000011643	psmc4	ENSENLP00000011643	ENSENLP00000024056	Proteasome 26S subunit, non-ATPase 2.	Proteasome 26S subunit, ATPase 4.	0.999
ENSENLP00000011643	psmd12	ENSENLP00000011643	ENSENLP00000025761	Proteasome 26S subunit, non-ATPase 2.	Proteasome 26S subunit, non-ATPase 12.	0.999
ENSENLP00000011643	psmd13	ENSENLP00000011643	ENSENLP00000027265	Proteasome 26S subunit, non-ATPase 2.	Proteasome 26S subunit, non-ATPase 13.	0.999
ENSENLP00000011643	psmd6	ENSENLP00000011643	ENSENLP00000015945	Proteasome 26S subunit, non-ATPase 2.	Proteasome 26S subunit, non-ATPase 6.	0.999
ENSENLP00000011643	psmd8	ENSENLP00000011643	ENSENLP00000027139	Proteasome 26S subunit, non-ATPase 2.	Proteasome 26S subunit, non-ATPase 8.	0.999
ENSENLP00000016947	ENSENLP00000011643	ENSENLP00000016947	ENSENLP00000011643	Proteasome 26S subunit, non-ATPase 7.	Proteasome 26S subunit, non-ATPase 2.	0.999
ENSENLP00000016947	ENSENLP00000021857	ENSENLP00000016947	ENSENLP00000021857	Proteasome 26S subunit, non-ATPase 7.	Proteasome 26S subunit, non-ATPase 1.	0.999
ENSENLP00000016947	LOC115044433	ENSENLP00000016947	ENSENLP00000024789	Proteasome 26S subunit, non-ATPase 7.	26S proteasome non-ATPase regulatory subunit 4-like.	0.998
ENSENLP00000016947	psmc2	ENSENLP00000016947	ENSENLP00000008133	Proteasome 26S subunit, non-ATPase 7.	Proteasome 26S subunit, ATPase 2.	0.999
ENSENLP00000016947	psmc3	ENSENLP00000016947	ENSENLP00000017290	Proteasome 26S subunit, non-ATPase 7.	Proteasome 26S subunit, ATPase 3.	0.999
ENSENLP00000016947	psmc4	ENSENLP00000016947	ENSENLP00000024056	Proteasome 26S subunit, non-ATPase 7.	Proteasome 26S subunit, ATPase 4.	0.999
ENSENLP00000016947	psmd12	ENSENLP00000016947	ENSENLP00000025761	Proteasome 26S subunit, non-ATPase 7.	Proteasome 26S subunit, non-ATPase 12.	0.999
ENSENLP00000016947	psmd13	ENSENLP00000016947	ENSENLP00000027265	Proteasome 26S subunit, non-ATPase 7.	Proteasome 26S subunit, non-ATPase 13.	0.999
ENSENLP00000016947	psmd6	ENSENLP00000016947	ENSENLP00000015945	Proteasome 26S subunit, non-ATPase 7.	Proteasome 26S subunit, non-ATPase 6.	0.999
ENSENLP00000016947	psmd8	ENSENLP00000016947	ENSENLP00000027139	Proteasome 26S subunit, non-ATPase 7.	Proteasome 26S subunit, non-ATPase 8.	0.999